Research Article |
Corresponding author: Alexandra Hiller ( alexandrahiller40@gmail.com ) Academic editor: Sammy De Grave
© 2022 Alexandra Hiller, Bernd Werding.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Hiller A, Werding B (2022) Multigene phylogeny of the Indo–West Pacific genus Enosteoides (Crustacea, Decapoda, Porcellanidae) with description of a new species from Australia. Zoosystematics and Evolution 98(2): 387-397. https://doi.org/10.3897/zse.98.90540
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The porcellanid genus Enosteoides Johnson, 1970, currently containing six species, was raised in the 1970s to contain aberrant Indo–West Pacific forms of the diverse and cosmopolitan genus Porcellana Lamarck, 1801. Here, we describe the most aberrant form as Enosteoides spinosus sp. nov., from the northeast and northwest coasts of Australia and present results on phylogenetic reconstructions of the genus, based on an 1,870 bp alignment of concatenated DNA sequences of three mitochondrial and one nuclear gene. The new species is peculiarly spiny and has a higher morphological affinity to the type species of the genus, E. ornatus (Stimpson, 1858), than to the other congeneric species. Our molecular results indicate that Enosteoides is not monophyletic. The new species and E. ornatus are encompassed in a clade, which does not share immediate common ancestry with the clade containing the other species of Enosteoides. This clade is more closely related to species of Porcellana and Pisidia. Relatively large interspecific genetic distances between and within the two clades, as compared to distances estimated in American pairs of species on each side of the Panama Isthmus, suggest ancient divergence, probably followed by extinction events or low speciation rate. Relatively large intraspecific distances between Australian populations of the new species of Enosteoides from geographically distant locations suggest some level of phylogeographic structure.
comparative morphology, marine biodiversity, mitochondrial and nuclear markers, molecular systematics, porcelain crabs, systematics, taxonomy
Porcellanid crabs comprise a morphologically and ecologically diverse family of decapod crustaceans containing over 300 species in 29 genera with littoral or sublittoral distributions in tropical and temperate regions of all oceans (
The Indo–West Pacific (IWP) genus Enosteoides Johnson, 1970 was first established by
In her review of the genus Porcellana,
Here, we describe Enosteoides spinosus sp. nov. from Australia, which, at first glance, looks quite different from all known species of Enosteoides because of its extremely spiny carapace and remarkably spiny and sculptured chelipeds. Nevertheless, the new species agrees with the diagnosis for Enosteoides by
We collected or obtained specimens of Enosteoides and other porcellanids from the following museums (see Table
Species of porcellanids included in the molecular analyses, sampling localities and collection data. Taxa are listed in alphabetical order. Collection data are followed by DNA codes. GenBank (GB) sequences of each gene used in the molecular analyses are shown with respective accession numbers. A species of galatheid squat lobster was used as outgroup (OG); See text for museum codes.
Species | n | Sampling localities | Collection Data and GB |
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Enosteoides ornatus | 2 | Indian Ocean, Arabian Sea, India, Goa, Anjuna Beach | Under rocks, 1.5 m (mid-tide), coll. S. Harkantra, A. Hiller, B. Werding, Nov. 2006; DNA–W2A |
Indian Ocean, Arabian Sea, India, Goa, Bogmolo Beach | Under rocks, 5 m (mid-tide), coll. S. Harkantra, A. Hiller, B. Werding, Nov 2006; DNA–W3A | ||
Enosteoides palauensis | 2 | West Pacific Ocean, Vanuatu, Espíritu Santo Island |
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West Pacific Ocean, Vanuatu, Espíritu Santo Island |
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Enosteoides philippinensis | 2 | West Pacific Ocean, Philippines, Puerto Princesa Bay | WPU–01; in mangrove forest with coral rubble, coll. R. Dolorosa, 14 Jun 2004; DNA–929A |
West Pacific Ocean, Philippines, Puerto Princesa Bay | WPU–02; in mangrove forest with coral rubble, coll. R. Dolorosa, 14 Jun 2004; DNA–929B | ||
Enosteoides spinosus sp. nov. | 4 | Indian Ocean, West Australia, Kimberley District, Beagle Reef |
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Indian Ocean, West Australia, Kimberley District, Patricia Island |
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West Pacific Ocean, East Australia, Queensland District, Heron Island, NE side of Wistari Reef |
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West Pacific Ocean, East Australia, Queensland District, Heron Island, NE side of Wistari Reef |
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Enosteoides turkayi | 1 | West Pacific Ocean, Philippines, Biking, Panglao Island | LKCNHM (ex ZRC) 2RC2016.0063, paratype female, stn T29, 77–84 m, mud, coll. PANGLAO 2004 Marine Biodiversity Project, 1 Jul 2004; DNA–8280 |
Galathea squamifera (OG) | 1 | East Atlantic Ocean, France, Saint Maló Bay, Saint Maló | Under rocks, intertidal, coll. A. Hiller, Sep. 2000; DNA–41 |
Pachycheles biocellatus | 1 | East Pacific Ocean, Ecuador, Salinas | GB MN715753 (16S), MN711998 (Cytb), MN712184 (H3); DNA–D29A |
Pachycheles monilifer | 1 | West Atlantic Ocean, Venezuela, Cubagua Island | GB MN715754 (16S), MN711999, (Cytb), MN712185 (H3); DNA–q9A |
Pachycheles pilosus | 1 | West Atlantic Ocean, U.S.A., Florida, Key Biscayne | GB MN715755 (16S), MN712000 (Cytb), MN712186 (H3); DNA–138B |
Petrolisthes armatus | 2 | West Atlantic Ocean, U.S.A, Florida, Fort Pierce, intertidal | GB KY857020 (16S), KY857297 (COI), MN711994 (Cytb), MN712180 (H3); DNA–135 |
East Pacific Ocean, Colombia, Nuquí | GB KY857243 (16S), KY857520 (COI), MN711997 (Cytb), MN712183 (H3); DNA–O11A | ||
Pisidia bluteli | 2 | East Atlantic Ocean, Balearic Sea, Spain, Catalonia, Costa Brava | Under rocks, intertidal, coll. B. Werding, Sep 2001; DNA–51 |
East Atlantic Ocean, Adriatic Sea, Croatia, Rovinje | Under rocks, intertidal, coll. J. Medenbach, Sep 2001; DNA–1119 | ||
Porcellana africana | 1 | East Atlantic Ocean, Senegal, Ngor Island | Under rocks, 1 m, coll. P. Wirtz, Oct 2009; DNA–9165C |
Porcellana platycheles | 2 | East Atlantic Ocean, France, Saint Maló Bay, Saint Maló | Under rocks, intertidal, coll. A. Hiller, Sep 2000; DNA–48 |
East Atlantic Ocean, Strait of Gibraltar, Spain, Andalucía, Tarifa, Torre de la Peña | Under rocks, intertidal, coll. S. Sereda, Sep 2007; DNA–58 |
Specimens and GenBank sequences used in the molecular analyses are listed in Table
DNA was extracted from muscle tissue of chelipeds or walking legs using the DNeasy Blood and Tissue Kit (Qiagen) following the manufacturers protocol for animal tissues. A 540 bp (base pair) fragment of the ribosomal 16S rDNA was amplified using primers 16Sar (5′ CGCCTGTTTATCAAAAACAT) and 16Sbr (5′ CCGGTCTGAACTCAGATCACGT) (
PCR product amplifications were cleaned using the ExoSap–IT kit (USB Corporation). When more than one PCR product were amplified, the one of proper size was cut out of a 2% low–melt agarose gel after electrophoresis in 1× TAE buffer. Samples were incubated at 70 °C for 10 min and then, after adding 1.5 µl of GELaseTM (Epicentre Biotechnologies), they were incubated at 45 °C for 5 hours. We used the BigDyeTM Terminator version 3.1 Cycle Sequencing Kit to cycle–sequence clean PCR products in both directions and an Applied Biosystems3130 Genetic Analyzer to electrophorese resulting fragments.
The BIOEDIT Sequence Alignment Editor (
Distances between Atlantic and Pacific individuals of Petrolisthes armatus have been reported as the smallest between members of American geminate Porcellanidae (
Family Porcellanidae Haworth, 1825.
Holotype
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Paratypes
: INDIAN OCEAN, WESTERN AUSTRALIA, KIMBERLEY DISTRICT: White Island, 15°58.58'S, 124°20.40'E, Station 68/K11–T1, 14 m depth, 17 Oct 2011, A.M. Hosie leg.,
Carapace hexagonal, broadest at mesobranchial level; dorsal surface strongly areolate, with spines on hepatic and epibranchial regions; acute spines on orbital, epibranchial and mesobranchial borders; front prominent, trilobed in frontal view, median lobe pronounced, lateral lobes each with a sharp terminal spine. Cheliped carpus about three times as long as wide, dorsal surface heavily eroded, with two broad longitudinal ridges, anterior margin straight with a row of three or more slender spines, posterior margin with five or six strong teeth; manus broad, depressed dorsoventrally, dorsal surface with irregular granules and a prominent crest on mid-line, inner border with strong, upright tooth; outer border concave, with row of sparse strong spines, dactylus with rounded median crest on dorsal surface and strong spines on inner border. Telson broad, composed of five plates.
Carapace about as long as wide, broadest at mesobranchial level; dorsal surface strongly areolate, regions distinct and separated by deep grooves; protogastric crest blunt, but steep, with scattered, stiff setae. Front prominent, truncate in dorsal view, trilobed in frontal view, lateral lobes subparallel, each with a sharp, forwardly directed spine terminally, followed inwards by a smaller, rounded tooth; median lobe pronounced exceeding lateral lobes, outer borders with a row of small, acute spines, decreasing in size posteriorly; frontal margin with long, stiff setae.
Orbits relatively shallow, each with one prominent supraorbital spine and a smaller spine at outer orbital angle. Hepatic region with a strong, forwardly directed spine above elevation of median part; hepatic margin with a prominent spine. Epibranchial region with small spines on elevation. Mesobranchial border with three spines, anterior two spines strong, third spine smallest, located near metabranchial region.
Sidewalls broad, surface granulated and eroded, with transverse ridge, partly covered with long, feathered setae; anterior margin ventrally with a row of forwardly directed blunt spines.
Anterior margin of third thoracic sternite slightly convex, lateral lobes prominent, resembling forwardly directed horns. Anterior margin of fourth thoracic sternite concave.
Eyes moderately large, ocular peduncles largely visible from dorsal side, distally with a distal, forwardly directed stiff seta, dorsal extension into cornea rounded.
Basal segment of antennular peduncle elongate, inner and outer lobes of anterior margin each with a terminal strong spine, inner lobe with a row of smaller spines on inner border. First segment of antennal peduncle strongly produced forwardly, broadly in contact with orbital margin, anterior margin bent upwards with a bifurcated, upwardly directed lobe; second to fourth segments movable, second segment short, with small spine at posterior distal end; third segment elongated with strong anterodistal spine; fourth segment rounded with small anterodistal spine. Antennal flagellum about 2.5 times as long as carapace, articulations thickened distally, bearing some stiff setae.
Ischium of third maxilliped broad, rounded distally; merus triangular, slightly concave distally; inner margin with some small spinules on distal edge; carpus with a triangular, spine–tipped projection on inner margin; propodus broad at proximal end, narrower distally; dactylus elongate, rounded on distal margin.
Chelipeds subequal, slender, dorsal surface heavily eroded. Merus granulated with scattered, irregular, scale–like and acute protuberances on dorsal surface, anterodistal margin produced into a broad, rounded lobe with irregular protuberances and squarrose outer border. Carpus about three times as long as wide; dorsal surface with two broad longitudinal ridges, one running along mid-line, ending distally in a serrated lobe; another ridge along anterior border, separated from median ridge by a deep, steep grove; anterior margin straight, with row of three or more slender, distally somewhat curved spines of different size; posterior margin slightly convex, separated from dorsomedian ridge by a steep slope, bordered with five or six massive, distally curved teeth. Manus broad, depressed dorsoventrally, outer border concave; surface of propodus with large, irregular granules and a prominent, granulated longitudinal crest; outer border concave on median part, with a row of sparse, massive spines bearing long, simple setae. Dactylus with rounded median crest on dorsal surface and a row of massive spines on outer border.
Merus of walking legs smooth with scattered, simple and feathered setae; upper border with an acute spine near distal end, additional spines sometimes present. Carpus with longitudinal depression and some stiff setae on upper side, with a strong spine; additional spines sometimes present on median part. Propodus slender, dorsal margin with one to three spines on different positions. Dactylus with four movable spines ventrally.
Telson broad, composed of five plates.
The specific name spinosus refers to the extremely spiny appearance of the new species.
Enosteoides spinosus sp. nov. has been so far reported from the Australian coasts of the Kimberley and Queensland Districts.
The species was found in the intertidal region to a depth of 14 m, in patchy reef structures with invertebrates such as sponges, hydroids, hard and soft corals and in areas with coral rubble, coarse sediment and a fine dusting of silt.
The specimens from Kimberly had been recently preserved at the time of examination and colouration was greyish-brown.
The new species gives a first impression of being morphologically distant from the other species of Enosteoides as currently defined, mainly due to the excess of sharp spines ornamenting the carapace and chelipeds. The new species is morphologically closer to E. ornatus than to any other species in the genus. Common characters to the two species are the spiny basal article of the antennular peduncle, the distinct spines on supra-orbital, hepatic and branchial regions and the spiny or tuberculate surface of the outer half of the palm of the chelipeds. The two main diagnostic characters of the new species is the telson, which is composed of five plates, instead of seven, a condition present in all other congeneric species and the proximal margin of the carpus, which bears sharp teeth in the new species, while it bears small denticules in E. ornatus.
Enosteoides spinosus sp. nov., female paratype
The topologies of the phylogenetic trees of Enosteoides and other porcellanid taxa produced by Maximum Likelihood (ML) and Bayesian Inference (BI), based on concatenated sequences of three mitochondrial and one nuclear gene, were congruent. The consensus tree (Fig.
Phylogeny of concatenated mitochondrial (16S, COI and Cytb) and nuclear (H3) haplotypes of Enosteoides illustrating the consensus tree inferred by Maximum Likelihood (ML) and Bayesian (BA) analyses. Clades with < 80% bootstrap support (ML reconstruction) or posterior probability (BA reconstruction) were collapsed. Tip labels show names of species, sampling locality and DNA code.
Table
Mean percent Kimura two–parameter distances within Enosteoides and between sister taxa of other porcellanid genera. Distances were estimated for each mitochondrial gene fragment (16S, COI and Cytb) and for the concatenated set (Conc) of mitochondrial and nuclear genes (H3) and are listed in ascending order of divergence. EM = East Mediterranean; EP = East Pacific; G = Gibraltar; WInd = West India; K = Kimberley District, Australia; NF = Northern France; Phil = Philippines; Q = Queensland District, Australia; S = Senegal; Vanu = Vanuatu; WA = West Atlantic; WM = West Mediterranean; NA = non-applicable because no COI sequences of the fragment used in the present analyses are available (see text).
Species | 16S | COI | Cytb | Conc |
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Between species | ||||
Porcellana platycheles (NF+G)–P. africana (S) | 1.32 | 6.20 | 3.31 | 2.21 |
Enosteoides palauensis–E. philippinensis | 8.77 | 12.44 | 21.06 | 10.37 |
Enosteoides turkayi–E. philippinensis | 8.90 | 12.24 | 28.45 | 11.51 |
Enosteoides palauensis–E. turkayi | 11.34 | 16.58 | 27.66 | 13.51 |
Enosteoides ornatus–E. spinosus sp. nov. | 17.15 | 23.37 | 30.65 | 18.44 |
Enosteoides philippinensis–E. spinosus sp. nov. | 24.78 | 24.57 | 36.05 | 23.50 |
Enosteoides philippinensis–E. ornatus | 26.86 | 24.26 | 37.84 | 23.98 |
Enosteoides turkayi–E. ornatus | 31.53 | 25.51 | 35.91 | 25.07 |
Enosteoides turkayi–E. spinosus sp. nov. | 28.95 | 26.37 | 39.80 | 25.67 |
Enosteoides palauensis–E. ornatus | 31.67 | 26.54 | 38.16 | 25.75 |
Enosteoides palauensis–E. spinosus sp. nov. | 32.22 | 26.00 | 40.08 | 26.14 |
Between geminate species | ||||
Petrolisthes armatus (WA)–(EP) | 1.74 | 5.29 | 4.41 | 3.21 |
Megalobrachium poeyi (WA)–M. pacificum (EP) | 3.41 | NA | 13.65 | NA |
Megalobrachium mortenseni (WA)–M. lemaitrei (EP) | 4.21 | NA | 13.71 | NA |
Megalobrachium roseum (WA)–M. festai (EP) | 5.27 | NA | 15.58 | NA |
Within species | ||||
Porcellana platycheles (NF)–(G) | 0.20 | 0.64 | 0.34 | 0.34 |
Enosteoides ornatus (WInd) | 0.40 | 0.79 | 1.41 | 0.66 |
Enosteoides philippinensis (Phil) | 0.00 | 0.67 | 2.88 | 0.78 |
Enosteoides palauensis (Vanu) | 0.60 | 1.15 | 1.99 | 0.95 |
Enosteoides spinosus sp. nov. (K)–(Q) | 0.00 | 2.93 | 2.45 | 1.31 |
Pisidia bluteli (WM)–(EM) | 0.21 | 3.24 | 6.49 | 2.29 |
The smallest concatenated distances between Atlantic and Pacific individuals of Petrolisthes armatus are close to 3% and those based on 16S and Cytb sequences are around 2% and 5%, respectively. Interspecific concatenated distances within Enostoides are remarkably large, with the smallest values (around 10–13%) corresponding to comparisons between E. palauensis, E. philippinensis and E. turkayi (Clade C1). Distances between these species, based on the 16S and Cytb fragments are, respectively, almost three and two times larger than those estimated between American geminates of Megalobrachium.
Concatenated distances between E. spinosus sp. nov. and E. ornatus show divergence close to 18% and those estimated between these two species and the rest of Enosteoides range between 23% and 26%. Such large distances, along with the topology of the phylogeny depicting independent clades, one conformed by the new species and E. ornatus (Clade B) and the other by the other species of Ensoteoides (Clade C1), confirm that the genus is not monophyletic.
Although few specimens of the East Atlantic species of Porcellana and Pisidia were included in our analyses, comparisons of their concatenated distances serve as reference of relatively recent speciation events. Individuals of Porcellana platycheles from the North and the Mediterranean Seas differ from P. africana from Senegal by distances close to 2%, which are smaller than those found between the Western Atlantic and Eastern Pacific populations of Petrolisthes armatus. The concatenated distance estimated between the two Australian populations of Enosteoides spinosus sp. nov. from distant localities on the northeast and northwest coasts of Australia averaged at around 1.3%. This value is smaller than the transisthmian distance of P. armatus and the distance estimated between individuals of Pisidia bluteli from opposite coasts of the Mediterranean (approximately 2.3%). However, the distance within Enosteoides spinosus sp. nov. is larger than that found within E. palauensis (approximately 1%) and E. philippinensis (approximately 0.8%), suggesting some level of restriction of gene flow between the Kimberley and Queensland regions.
Our phylogenetic reconstructions of Enosteoides, based on three mitochondrial and one nuclear gene, depict two distantly-related lines independently leading to similar diagnostic morphologies: one line (clade B in Fig.
Our results rely on few samples of each species and, therefore, our phylogeographic deductions should be taken with caution and be confirmed or rejected in a future study including larger samples from different populations. The large interspecific genetic distances within each of the independent clades of Enosteoides suggest either ancient speciation events probably followed by high rates of extinction or a low rate of speciation within these evolutionary lines. Our reference to small interspecific genetic distances and to relatively-recent dates of divergence in other genera relies on values estimated between the extant American transisthmian Petrolisthes armatus and the geminate pairs of Megalobrachium. The lowest divergence values between geminates of Megalobrachium date from the late Miocene (approximately 8.9 million years ago–MYA) to the late Pliocene (circa 3 MYA), when the Isthmus of Panama was completed (
Relatively-large intraspecific genetic distances between E. spinosus sp. nov. from the northeast and northwest coast of Australia provide a first glance into a possible phylogeographic break along the coastline separating the Kimberley and Queensland regions, a geographic distance of over 5,000 km. Convoluted patterns of water circulation between the Indian and Pacific Oceans (
Despite low sample size, comparisons within the East Atlantic species of Porcellana and Pisidia included in this study, allow predictions of recent speciation events and phylogeographic breaks. The highly similar Porcellana platycheles and P. africana were first designated by
Relatively high intraspecific divergence within Pisidia bluteli from opposite coasts of the Mediterranean is indicative of either isolation by distance or the presence of a species complex.
We thank A.M. Hosie (