Research Article |
Corresponding author: Miriam García-Ruiz ( migarcir@ujaen.es ) Academic editor: Andreas Schmidt-Rhaesa
© 2025 Miriam García-Ruiz, Joaquín Abolafia, Reyes Peña-Santiago.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
García-Ruiz M, Abolafia J, Peña-Santiago R (2025) Retrieval of the genus Capitellus Siddiqi, 1983, with description of C. caramborum sp. nov. (Dorylaimida, Belondiridae) associated with Andalusian (Spain) olive groves. Zoosystematics and Evolution 101(2): 571-581. https://doi.org/10.3897/zse.101.144719
|
A new species of belondirid nematode, collected in olive groves of the southern Iberian Peninsula, is described, including SEM observations and molecular (LSU, SSU) study. Capitellus caramborum sp. nov. is characterized by its 0.82–1.09 mm long body, lip region offset by constriction and 6.0–6.5 µm wide with a distinct perioral refractive disc 4.0–4.5 µm wide, odontostyle 6.0–6.5 µm long, odontophore bearing basal flanges and 1.8–2.0 times the odontostyle long, neck 223–296 µm long, pharyngeal expansion occupying 53–59% of the total neck length, female genital system diovarian, uterus simple and 27–38 µm or 1.4–1.9 body diameters long, vulva (V = 53–56) longitudinal, tail convex conoid to subcylindrical (24–34 µm, c = 31–38, c’ = 1.8–2.1), spicules strongly curved ventrad and 23–25 µm long, and four ventromedian supplements. Morphological and molecular data support the retrieval of Capitellus as a valid genus, its taxonomy being updated, including the transference of Dorylaimellus neocapitatus to it.
Description, dorylaims, LSU, morphology, nematodes, new combination, phylogeny, SSU, taxonomy
In his revision of the subfamily Dorylaimellinae Jairajpuri, 1964,
Available information about the type and only species, C. capitatus (Siddiqi, 1964)
Two populations of a Dorylaimellinae taxon were collected in the course of a nematological survey conducted to study the free-living fauna inhabiting olive soils in the framework of the project Soil O-Live (EU Horizon Program grant No 101091255). Its morphological and molecular study revealed that it belonged to an unknown form very similar to C. capitatus and D. neocapitatus. Thus, this contribution aims to describe it, to obtain its molecular characterization, and to discuss its evolutionary relationships. The results are presented in the following.
A total of 20 specimens found in soils of olive groves were available to study. Nematodes were extracted by centrifugation (
For molecular analyses, single specimens were temporarily mounted in a drop of 1 M sodium chloride containing glass beads. This was followed by DNA extraction from single individuals as described by
For phylogenetic relationships, analysis was based on 18S and 28S rDNA fragments. The obtained sequences were manually edited using Chromas 2.6.6 (Technelysium) and aligned with other rDNA sequences available in GenBank using the ClustalW alignment tool implemented in MEGA7 (
Fourteen females and six males from two locations, in variable states of preservation.
See Table
Main morphometrics of Capitellus species. Measurements in µm except L in mm, and in the form: average ± sd (range).
Species | C. caramborum sp. nov. | C. capitatus | C. neocapitatus | |||
---|---|---|---|---|---|---|
Population | Baena | Antequera | Type | Several | ||
Country | Spain | Spain | India | Spain | ||
Holotype | Paratypes | |||||
n | ♀ | 7♀♀ | 6♂♂ | 6♀♀ | 11♀♀ | 23♀♀ |
Character | ||||||
L | 0.98 | 0.94 ± 0.05 (0.88–1.04) | 0.88 ± 0.05 (0.82–0.94) | 1.04 ± 0.50 (0.97–1.09) | 0.58–0.65 | 0.75–0.99 |
a | 47 | 45.3 ± 3.1 (40–49) | 45.3 ± 3.1 (40–49) | 48.7 ± 2.3 (44–51) | 30–37 | 35–42 |
b | 3.6 | 3.7 ± 0.2 (3.5–4.1) | 3.7 ± 0.2 (3.5–4.1) | 3.7 ± 0.1 (3.6–3.9) | 2.7–3.3 | 2.7–3.7 |
c | 34 | 35.0 ± 2.3 (31–38) | 35.0 ± 2.3 (31–38) | 34.0 ± 2.0 (32–36) | 21–25 | 28–39 |
V | 54 | 54 ± 1.0 (53–56) | – | 54.0 ± 1.0 (53–56) | 54–56 | 52–59 |
c’ | 2.0 | 1.9 ± 0.1 (1.8–2.0) | 2.1 ± 0.1 (2.0–2.1) | 2.1 ± 0.1 (1.9–2.1) | 2.21 | 1.3–1.7 |
Lip region diameter | 6.5 | 6.3 ± 0.2 (6.0–6.5) | 6.3 ± 0.3 (6.0–6.5) | 6.3 ± 0.3 (6.0–6.5) | ? | 6.5–7.5 |
Odontostyle length | 6.0 | 6.1 ± 0.2 (6.0–6.5) | 6.1 ± 0.2 (6.0–6.5) | 6.3 ± 0.3 (6.0–6.5) | 4.5 | 5.0–5.5 |
Odontophore length | 12 | 11.9 ± 0.4 (11.5–12.5) | 12.1 ± 0.3 (12–12.5) | 12.1 ± 0.5 (11.5–12.5) | 13–14 | 10–12 |
Neck length | 268 | 253 ± 14 (225–268) | 248 ± 25 (223–283) | 282 ± 17 (252–296) | 2171 | 221–278 |
Pharyngeal expansion length | 143 | 137 ± 14 (106–155) | 134 ± 16 (111–158) | 153 ± 19 (118–174) | 1131 | 131–159 |
Body diameter at neck base | 21 | 21.0 ± 0.9 (20–23) | 20.1 ± 0.8 (19–21) | 21.6 ± 1.1 (20–23) | ? | 20–26 |
mid-body | 21 | 20.9 ± 1.0 (20–23) | 19.9 ± 0.7 (19–21) | 21.3 ± 0.8 (20–22) | 201 | 21–28 |
anus/cloaca | 14 | 14.9 ± 0.7 (14–16) | 15.9 ± 0.5 (15–17) | 14.9 ± 0.6 (14–16) | 121 | 15–18 |
Distance vulva – anterior end | 529 | 512 ± 34 (464–574) | – | 562 ± 27 (522–595) | 3541 | 420–533 |
Prerectum length | 90 | 94.5 ± 3.0 (90–96) | 72.4 ± 9.9 (58–79) | 94.6 ± 3.1 (92–98) | ? | 62–98 |
Rectum/cloaca length | 19 | 18.7 ± 1.3 (17–20) | ? | 19.4 ± 0.2 (19–20) | ? | 12–18 |
Tail length | 29 | 27.0 ± 1.7 (24–29) | 33.0 ± 1.0 (32–34) | 30.6 ± 1.0 (29–32) | 26 | 23–28 |
Spicules length | – | – | 24.3 ± 0.8 (23–25) | – | – | – |
Ventromedian supplements | – | – | 4 | – | – | – |
Baena (type) population:
Adult.
Slender (a = 40–49) nematodes of small to medium size, 0.82–1.04 mm long. Body cylindrical, tapering towards both extremities. Upon fixation, habitus regularly curved ventrad, often adopting an open C shape. Cuticle dorylaimid, two-layered, thin, ca 1 µm thick throughout the entire body, outer layer bearing very fine transverse striation, better observable with SEM. Lateral chord 6.0–6.5 µm wide, occupying less than one-third (26–31%) of mid-body diameter, bearing abundant granular gland bodies. Body pores abundant, appearing as (SEM observations, Fig.
Capitellus caramborum sp. nov. A–H, J. Female; I, K–M. Male; A. Entire; B. Anterior region, lateral median view; C. Pharyngeal expansion with globules; D. Pharyngeal expansion without globules; E. Neck region; F. Anterior genital branch; G. Anterior region, lateral surface view; H, K. Caudal region; I. Posterior body region with ventromedian supplements; L. Lateral guiding piece; M. Spicule. Scale bars: 200 μm (A); 5 μm (B, G, J, L); 50 μm (C–E); 25 μm (F, I); 10 μm (H, K, M).
Capitellus caramborum sp. nov. (Female, LM). A. Entire; B, C. Anterior body region, lateral median view; D. Anterior genital branch; E. Anterior region, lateral surface view; F. Neck region; G. Pharyngeal expansion with globules; H. Pharyngeal expansion without globules; I. Vagina region; J. Caudal region. Scale bars: 200 μm (A); 5 μm (B, C, E, I); 25 μm (D); 50 μm (F, G, H); 10 μm (J).
A–E. Capitellus caramborum sp. nov. (Male, LM). A. Posterior body region, with arrowheads pointing at ventromedian supplements; B. Caudal region; C. Spicule; D. Lateral guiding piece; E. Sperm cells; F–H. Capitellus neocapitatus (Peralta & Peña-Santiago, 2000), comb. nov.; F–H. Female tail. Scale bars: 10 μm (A, B, F–H); 5 μm (C); 2 μm (D, E).
Capitellus caramborum sp. nov. (SEM). A. Lip region, lateral view; B. Lip region, in face view; C. Vulva, ventral view; D, E. Perioral disc, in face view; F. Vulva region, lateral view; G. Female caudal region, subventral view; H. Cloacal aperture and ad-cloacal genital papillae; I. Detail of ventromedian supplement; J. Caudal pores of female tail. Scale bars: 1 μm (A, B, D, E, I, J); 2 μm (C, F, H); 5 μm (G).
Female. Genital system diovarian, with both branches equally and variably developed, the anterior 74–122 µm or 8–12% of the total body length, the posterior 87–108 µm or 9–11%. Ovaries comparatively small, often not reaching the oviduct-uterus junction, 31–61 µm the anterior and 36–48 µm the posterior, with oocytes first arranged in two or more rows and then in one single one. Oviduct 42–65 µm or 2.1–3.3 body diameters long, consisting of a long and slender distal region made of prismatic cells and a developed proximal pars dilatata with visible lumen. A distinct sphincter present between oviduct and uterus. Uterus a simple tube-like structure 27–38 µm or 1.4–1.9 body diameters long. Vagina extending inwards 8.0–9.5 µm, to less than one-half (38–45%) of body diameter: pars proximalis 5.0–6.0 × 6.0–6.5, with almost straight to somewhat convergent walls that are encircled by weak musculature, pars distalis 3.0 µm long. Vulva a longitudinal slit ca 2 µm long. Prerectum 6.2–6.6, rectum 1.2–1.3 anal body diameters long. Tail convex conoid to slightly subcylindrical.
Male. Genital system diorchic, with opposite testes. In addition to the adcloacal pair, situated at 4–5 µm from the cloacal aperture, there invariably are four very simple (non-mammiform but a low pore-like structure, Fig.
Females are morphologically identical and morphometrically very similar to those of the type population, as the ranges of their more relevant measurements and ratios are coincident or widely overlap. No male found.
After sequencing and editing, four sequences were obtained for phylogenetic analyses. Two 18S rDNA sequences, 1719 bp in length (acc. PQ877190–PQ877191), showed 98.14% identity to a sequence (AY552969) assigned to Dorylaimellus virginianus Cobb, 1913 (Jairajpuri & Ahmad, 1980) and 97.85%, 97.62%, and 98.02% identity to sequences assigned to D. montenegricus Andrássy, 1959 (Jairajpuri & Ahmad, 1980), D. parvulus Thorne, 1939 (Jairajpuri & Ahmad, 1980), and D. tenuidens Thorne, 1939, respectively (AY284821, AY911968, and AY911972).
Two 28S rDNA sequences, 793 bp in length (acc.PQ877192–PQ877193), showed 83.61% identity to two sequences (KT258984, KT25985) assigned to Belondira bagongshanensis Wu, Huang, Xie, Wang & Xu, 2017, 91.14% to those of Belondira sp. (MG921267, MG921268), and 80.71% identity to B. coomansi Golhasan, Heydari, Miraeiz, Abolafia & Peña-Santiago, 2018 (MF363124).
The new species is characterized by its 0.82–1.09 mm long body, lip region offset by constriction, and 6.0–6.5 µm wide with a distinct perioral refractive disc 4.0–4.5 µm wide, odontostyle 6.0–6.5 µm long, odontophore bearing basal flanges and 1.8–2.0 times the odontostyle long, neck 223–296 µm long, pharyngeal expansion occupying 53–59% of the total neck length, female genital system diovarian, uterus simple and 27–38 µm or 1.4–1.9 body diameters long, vulva (V = 53–56) longitudinal, tail convex conoid to subcylindrical (24–34 µm, c = 31–38, c’ = 1.8–2.1), spicules strongly curved ventrad and 23–25 µm long, and four ventromedian supplements.
The new species is similar to C. capitatus and D. neocapitatus. It differs from C. capitatus, a mainly pantropical taxon, in its longer (0.82–1.09 vs. 0.58–0.65 mm) and slender (a = 44–51 vs. a = 30–37 in females) body, lip region offset by constriction (vs. almost continuous), larger odontostyle (5.5–6.5 vs. 4.5 µm), comparatively shorter tail (c = 31–38 vs. c = 21–25), and male present (vs. absent). From D. neocapitatus, a very close taxon, in its narrower lip region (6.0–6.5 vs. 6.5–7.5 µm wide, n = 21), longer odontostyle (6.0–6.5 vs. 5.0–5.5 µm) – it means that the odontostyle is almost equal vs. appreciably shorter than lip region diameter –, relatively shorter pharyngeal expansion (53–59 vs. 59–63% of the total neck length), more conoid (vs. more subcylindrical, Fig.
Southern peninsular Spain, the Andalusia region, Córdoba province, Baena municipality, “El Valle” farm (37.799704, -4.310439, elevation 351 m), where the new species was found in the rhizosphere of an olive grove.
Southern peninsular Spain, the Andalusia region, Málaga province, Antequera municipality, “La Capilla” farm (37.198283, -4.543868, elevation 491 m), where the new species was found in the rhizosphere of an olive grove.
The specific name refers to the “Carambos,” the familiar nickname of the first author’s mother.
Morphologically, C. caramborum sp. nov. forms a recognizable group of species together with C. capitatus and D. neocapitatus, all of them easily distinguishable by having a distinct perioral disc visibly refractive, which should be regarded as a very relevant synapomorphy (if not autapomorphy) in Dorylaimellinae. Besides, the general morphology of the three species is nearly identical, and their morphometrics (Table
Unfortunately, molecular studies of Dorylaimellinae representatives for comparison are limited to a few 18S-rDNA and no 28S-rDNA sequences. Thus, the evolutionary relationships of the new species as derived from the analyses whose results are presented in trees of Fig.
Present findings support the idea that Capitellus is a valid taxon. On the one hand, the new species now described is the third one displaying a very unusual (?unique) feature within Dorylaimellinae, and it forms a recognizable group with two previously known forms. On the other hand, the 18S tree shows that the two sequences of the new species form a clade that is separated from that including other Dorylaimellus species, which form part of another clade together with several belondirid taxa. Thus, Capitellus is provisionally recovered as a valid genus, and, consequently, D. neocapitatus is transferred to it.
Diagnosis
Small-sized nematodes, 0.58–1.09 mm long. Cuticle dorylaimid. Lip region continuous with the adjoining body or offset by weak constriction, with fused lips displaying a conspicuous, perioral, refractive disc. Amphid fovea cup-like, with large aperture. Cheilostom with variably perceptible perioral sclerotized pieces. Odontostyle dorylaimid, up to as long as lip region diameter. Guiding ring simple. Odontophore bearing flanged base. Pharyngeal expansion occupying one-half to two-thirds of the total neck length. Female genital system di-ovarian, with longitudinal vulva. Female tail conoid to subcylindrical. Spicules dorylaimid. Four variably spaced ventromedian supplements with hiatus.
Type species:
C. capitatus (Siddiqi, 1964) Siddiqi, 1983
= Dorylaimellus capitatus Siddiqi, 1964
= Dorylaimellus (Dorylaimellus) capitatus Siddiqi, 1964 (Jairajpuri & Ahmad, 1980)
= Dorylaimellus (Capitellus) capitatus Siddiqi, 1964 (Jairajpuri & Ahmad, 1992)
Other species:
C. caramborum sp. nov.
C. neocapitatus (Peralta & Peña-Santiago, 2000), comb. nov.
= Dorylaimellus neocapitatus Peralta & Peña-Santiago, 2000
This contribution derives from the project Soil O-Live. This project has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement No. 101091255 (Soil Deal for Europe – HORIZON-MISS-2021-SOIL-02-03). The authors thank Dr. Pablo Castillo (IAS, Córdoba, Spain) for his collaboration in molecular analyses and are grateful for the SEM pictures obtained with the assistance of technical staff (Amparo Martínez-Morales) and equipment belonging to the Centro de Instrumentación Científico-Técnica (CICT) of the University of Jaén.