Research Article |
Corresponding author: Chun-Xue You ( youchunxue@mail.bnu.edu.cn ) Corresponding author: Chao Jiang ( jiangchao0411@126.com ) Academic editor: Martin Husemann
© 2024 Jia-bo Fan, Chun-Xue You, Chao Jiang.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Fan J-bo, You C-X, Jiang C (2024) Rediscovery and phylogenetic analysis of Agnostrup, a least known genus of Mecistocephalidae (Chilopoda, Geophilomorpha) in China. Zoosystematics and Evolution 100(4): 1557-1568. https://doi.org/10.3897/zse.100.135994
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The genus Agnostrup Foddai, Bonato, Pereira & Minelli, 2003 is one of the least known genera within the family Mecistocephalidae Bollman, 1893. In this study, we rediscovered the genus Agnostrup in China and provided a comprehensive redescription of A. striatus (Takakuwa, 1949). Additionally, we conducted a molecular phylogenetic analysis using CO1, 16S, and 28S sequence data, revealing a low genetic distance between Agnostrup and Nannarrup Foddai, Bonato, Pereira & Minelli, 2003. After comparing the morphological characteristics of these two genera, we synonymized the genus Nannarrup syn. nov. with Agnostrup. As a result, three species previously belonging to the genus Nannarrup were transferred to Agnostrup: A. hoffmani (
Agnostrup, description, Mecistocephalidae, molecular phylogeny, taxonomy
The geophilomorph family Mecistocephalidae Bollman, 1893, recognized as a monophyletic basal clade, comprises approximately 170 species across 11 genera (
Agnostrup Foddai, Bonato, Pereira & Minelli, 2003, characterized by forcipular trochanteropraefemur with a well-developed tooth and 41 leg-bearing segments, is one of the least-known genera in the family Mecistocephalidae Bollman, 1893 (
Recently, we collected four specimens from Shanxi, China, that obviously belong to the genus Agnostrup. Based on a critical evaluation of published information and examination of fresh material, these specimens were identified as A. striatus; one of these specimens is selected and described here as the neotype for Taiwanella striata. We also revised the diagnostic characters of the genus Agnostrup and established the phylogenetic relationship of the family Mecistocephalidae based on the COI, 16S, and 28S sequence data. Molecular phylogenetics shows a close relationship between the genus Agnostrup and Nannarrup Foddai, Bonato, Pereira & Minelli, 2003. After comparing the morphological characters of these two genera, we synonymize the genus Nannarrup syn. nov. with Agnostrup.
Two adult male and two adult female specimens of Agnostrup spp. were collected from Shanxi Province, China (see additional geographic details below) in November 2023 and June 2024. These specimens were individually preserved in 75% ethanol and deposited in the herbarium of the
National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences (
Morphological terminology for external anatomy follows
Two body segments from each sample were used for DNA extraction. Following the manufacturer’s protocol, DNA was extracted using the DNeasy® Blood & Tissue Kit (QIAGEN GmbH, Germany). The polymerase chain reaction (PCR) was used to amplify the cytochrome c oxidase subunit I (COI), mitochondrial ribosomal gene 16S, and nuclear ribosomal DNA 28S fragments. PCR primers and programs are provided in Table
Loci | Primers Sequence 5– 3 | Program | References |
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CO1 | LCO1490 GGTCAACAAATCATAAAGATATTGG | 2min at 94 °C; 35 cycles of 15s at 95 °C, 40s at 45–47 °C and 45s at 72 °C; 10min at 72 °C |
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HCO2198 TAAACTTCAGGGTGACCAAAAAATCA | |||
16S | 16Sar CGCCTGTTTATCAAAAACAT | 5min at 95 °C; 35 cycles of 30s at 95 °C, 30s at 55 °C and 1min at 72 °C; 3min at 72 °C | Xiong and Kocher 1991 |
16Sb CTCCGGTTTGAACTCAGATC | |||
28S | 28SD1F GGGACTACCCCCTGAATTTAAGCAT | 3min at 95 °C; 35 cycles of 30s at 95 °C, 30s at 65 °C and 1min at 72 °C; 3min at 72 °C |
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28SrD4b CCTTGGTCCGTGTTTCAAGAC |
The genetic distance among genera of Mecistocephalidae was calculated using the Kimura 2-parameter model in MEGA X (
Maximum-likelihood (ML) tree were constructed using the concatenated dataset with IQ-tree 1.6.12 (
Sequences from the Agnostrup striatus, along with 16 other Mecistocephalidae samples from different genera and a sample from Geophilidae, were aligned. ML and BI analyses were utilized to construct phylogenetic trees for the combined COI+16S+28S dataset (Figs
In examining genetic distances within the Mecistocephalidae family, we focused on the Agnostrup genus and its relationship with other genera, using sequences from COI, 16S, and 28S mitochondrial DNA regions (Table
The list of specimens that were used in the phylogenetic analyses (the new sequences have been uploaded to GenBank).
Species | Voucher | Accession No. | Collection Location | References | ||
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16s | 28s | coi | ||||
Dicellophilus cf. praetermissus Tsukamoto & Eguchi, 2024 |
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PP788526 | PP750339 | PP737183 | Huanren, Liao Ning, China | the present study |
Proterotaiwanella tanabei Bonato, Foddai & Minelli, 2002 |
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PP788520 | PP750333 | PP737177 | Lian Yun Gang, Jiang Su, China | the present study |
Arrup sp. |
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PP788525 | PP750338 | PP737182 | Yan Cheng, Jiang Su, China | the present study |
Agnostrup striatus (Takakuwa, 1949) |
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PP788521 | PP750334 | PP737178 | Chang Zhi, Shan Xi, China | the present study |
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PP788522 | PP750335 | PP737179 | Ning Wu, Shan Xi, China | the present study | |
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PQ213467 | – | PQ222662 | Ning Wu, Shan Xi, China | the present study | |
Mecistocephalus sp. |
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PP788523 | PP750336 | PP737180 | Jing Shan, Hu Bei, China | the present study |
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PP788527 | PP750340 | OR864655 | Jian Shui, Yun Nan, China |
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Mecistocephalus multidentatus Takakuwa, 1936 |
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PP788524 | PP750337 | PP737181 | Heng Yang, Hu Nan, China | the present study |
Tygarrup javanicus Attems, 1929 | ZFMK-TIS-1428 DNA103936 | HM453226 | HM453286 | KM491598 | – |
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Agnostrup oyamensis (Tsukamoto,2022) | TS20210217-04 | LC715630 | LC715705 | LC715555 | Hinata, Isehara-shi, Kanagawa prefecture, Japan |
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TS20210725-02 | LC715631 | LC715706 | LC715556 | Hinata, Isehara-shi, Kanagawa prefecture, Japan |
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Agnostrup innuptus (Tsukamoto,2022) | TS20220307-15 | LC715484 | LC715559 | LC715634 | Makigawa, Tsushimacho, Uwajima-shi, Ehime prefecture, Japan |
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TS20220307-16 | LC715483 | LC715558 | LC715633 | Makigawa, Tsushimacho, Uwajima-shi, Ehime prefecture, Japan |
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TS20220307-17 | LC715482 | LC715557 | LC715632 | Makigawa, Tsushimacho, Uwajima-shi, Ehime prefecture, Japan |
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Dicellophilus carniolensis (C.L. Koch, 1847) | DNA102580 | HM453225 | HM453285 | KF569305 | – |
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LBv792 | – | – | – | – |
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Mecistocephalus guildingii Newport, 1843 | DNA100809 | AY288728 | HM453283 | AY288747 | – |
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PP788528 | PP750341 | PP737184 | Yuan Yang, Yun Nan, China | the present study | |
Clinopodes flavidus Koch, 1847 | PD-G7129 CHI094_Cf5 | MZ427910 | EU376008.1 | MH816990 | – |
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Mean K2P genetic distance between the genus Agnostrup and other genera of Mecistocephalidae.
Tygarrup | Proterotaiwanella | Nannarrup | Mecistocephalus | Dicellophilus | Arrup | |
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CO11 | 22.2% | 20.5% | 16.4% | 18.9% | 20.3% | 21.9% |
16S | 26.9% | 26.6% | 18.1% | 29.6% | 26.8% | 27.6% |
28S | 11.8% | 12.0% | 10.6% | 11.7% | 13.4% | 10.6% |
The genera Agnostrup and Nannarrup both belong to the subfamily Arrupinae and share the following diagnostic characters (
Examined genus | Mean distance (Standard error) | ||
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CO1 | 16S | 28S | |
1. Agnostrup | 13.3% (1.4%) | 12.7% (1.5%) | 2% (0%) |
Morphological comparison of six species within the genus Agnostrup are based on the description and reference pictures published by
Characters | A. paucipes (Miyosi, 1955) | A. striatus (Takakuwa,1949) | A. striganovae (Titova, 1975) | A. hoffmani Foddai, Bonato, Pereira & Minelli, 2003 | A. innuptus Tsukamoto, 2022 | A. oyamensis Tsukamoto, 2022 |
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body length | at least 20 mm | 20–35 mm | over 30 mm | 10.3 mm | 7.0–12.0 mm | 8.6 mm |
Clypeus: setae on the areolate part (each side) | 3 | 5–8 | 4–7 | 7 | 9 | 6–7 |
Clypeus: setae on the plagulae (each side) | 8 | 3–6 | 5 | 0 | 0 | 0 |
Clypeus: insulae | absent | present | absent | absent | present | absent |
lamellae on mandible | 5 | 5 | 6 | 4 | at least 4 | at least 4 |
second maxillae: pretarsus | absent | rudimentary truncate claw | absent | short spine | short spine | short spine |
Forcipular segment: article I | well-developed distal tooth | large tooth | large and blunt tooth | strong pigmented basal tooth | strong pigmented basal tooth | strong pigmented basal tooth |
Forcipular segment: article II | without tooth | without tooth | small sharp tooth | without tooth | without tooth | without tooth |
Forcipular segment: articleIII | without tooth | tubercle | small sharp tooth | without tooth | tubercle | tubercle not visible |
Forcipular segment: tarsungulum | long basal tooth | large and sharp tooth | large tooth | slightly pigmented basal tooth | well-pigmented basal denticle | well-pigmented basal denticle |
Ultimate leg-bearing segment: pretarsus | – | small tubercle | – | small spine | small tubercle | spine |
Agnostrup Foddai, Bonato, Pereira & Minelli, 2003.
Agnostrup Foddai, Bonato, Pereira & Minelli, 2003: 1254.
Agnostrup: Uliana, Bonato and Minelli 2007: 24.
Nannarrup Foddai, Bonato, Pereira & Minelli, 2003, syn. nov.
Krateraspis striganovae Titova, 1975 – by original designation.
Agnostrup hoffmani (Foddai, Bonato, Pereira & Minelli, 2003), comb. nov., Agnostrup innuptus (Tsukamoto, 2022), comb. nov., Agnostrup oyamensis (Tsukamoto, 2022), comb. nov., Agnostrup paucipes (Miyosi, 1955), Agnostrup striatus (Takakuwa, 1949), and Agnostrup striganovae (Titova, 1975).
Mecistocephalids with 41 leg-bearing segments; two clypeal plagulae separated by a mid-longitudinal stripe. Clypeal setae are arranged in a transversal band on the anterior part of the plagulae and on a medial part of the areolate clypeus; spiculum absent. Side-pieces of labrum are divided into anterior and posterior alae; the internal margin of each anterior ala is reduced to a point. Posterior alae with or without longitudinal stripes; posterior margin of labrum is not hairy. Mandible is provided with 4–6 pectinate lamellae. Coxosternum of the first maxillae is divided in the middle; coxosternum of the second maxillae is undivided. Telopodites terminals of the second maxillae with or without a claw. Forcipular trochanteropraefemur with one distal tooth pointing forward; forcipular articles II and III with or without teeth. Basal tooth of tarsungulum well developed. Forcipular tergum without median sulcus; sternal sulcus of trunk segments not furcate. 7–15 pores on the ventral surface of each coxopleuron; anal pores are present.
Agnostrup differs from other genera of the Mecistocephalidae previously recorded in China due to its unusual forcipular teeth: the trochanteropraefemur with one well-developed distal tooth pointing forward and a well-developed basal tooth of the tarsungulum. Agnostrup differs from Mecistocephalus by the presence vs. absence of a pair of spicules projecting from the cephalic pleurites. It differs from Proterotaiwanella in the pattern of clypeal setae and sensilla and the finger-like processes of the labrum (
Agnostrup clearly resembles Nannarrup morphologically and in geographical distribution. Nannarrup was established for a single species discovered in New York, USA, and is considered to have been introduced from western America or East Asia (
Therefore, the only definite difference between these two genera is the cephalic plate of Agnostrup, which has a frontal line, while Nannarrup lacks one. However, all three Nannarrup species have a smaller body length (ca. 10 mm) compared with the four Agnostrup species (ca. 15–30 mm). The frontal line may be absent in small mecistocephalid species.
Taiwanella striata Takakuwa 1949: 51–69, fig 1.
Taiwanella striata:
Agnostrup striatus:
Neotype
(this paper formally assigns): 1 male (
Non-type specimens
: 1 female (
An Agnostrup species with areolate part of the clypeus bearing a smooth insulae on each side. Telopodites of second maxillae with or without a rudimentary truncate claw. Forcipular article I with one large distal tooth, articles II without tooth, articles III with one acute tooth, tarsungulum with one large basal tooth.
[The original holotype data from
Cephalic plate
(Fig.
Agnostrup striatus (Takakuwa, 1949), (spm.
Antennae
(Fig.
Clypeus
(Fig.
Labrum
(Fig.
Mandible
(Fig.
First maxillae
(Fig.
Second maxillae
(Fig.
Forcipular segment
(Fig.
Agnostrup striatus (Takakuwa, 1949), (spm.
Leg-bearing segments
(Fig.
Ultimate leg-bearing segment
(Fig.
Postpedal segments
(Fig.
The type material of the species Taiwanella striata (Takakuwa, 1949) is not available and is probably lost (
Among these, three specimens had a noticeable rudimentary truncate claw on the telopodites of the second maxillae, while one specimen clearly lacked the claw. The claw of the second maxillae was clearly described by
Agnostrup striatus (Takakuwa, 1949). A. Forcipular segment, ventral view (spm.
The original description by
China (Shanxi).
The genus Arrup is nested at the base of Mecistocephalidae in both ML and BI analyses (PP = 1), which is inconsistent with the findings of
There are too many shared morphological characteristics between Agnostrup and Nannarrup, and the few differences, including the number of setae on the clypeal plagulae and the size of the forcipular tarsungulum, are too subtle. Compared to other genera in the family Mecistocephalidae, these characters are not significant enough to delineate them as two distinct genera. Additionally, the genetic distance between Agnostrup and Nannarrup is smaller than the distances between Agnostrup and other genera, indicating that they could also be considered the same genera genetically.
In addition to the genera Nannarrup, Agnostrup, and Arrup, Partygarrupius moiwaensis (Takakuwa, 1934) also belongs to the Arrupinae Chamberlin, 1912, and is an endemic species of Hokkaido Island, Japan. It has 41 pairs of legs, buccae without setae, and no spiculum. The coxosternum of the first maxillae is divided, while that of the second maxillae is undivided. The forcipular trochanteropraemur has only a distal tooth, and the tarsungulum has only one pointed tooth. The forcipular tergum lacks a median sulcus, and the sternal rhachides are not anteriorly furcate. Based on these similar morphological characteristics, we hypothesize that Partygarrupius moiwaensis (Takakuwa, 1934) may form a sister group with Nannarrup and Agnostrup in the phylogenetic tree. However, unlike Nannarrup and Agnostrup, it possesses an entire clypeal plagula, without a mid-longitudinal areolate stripe and extending along the lateral margins of the clypeus. This feature is similar to that of Tygarrup.
Based on morphological analysis and DNA barcoding, the genus Agnostrup now comprises six species. Detailed comparisons of species’ morphological characteristics can be found in Table
Most species of Arrupinae are confined to specific geographic locations, but the genus Agnostrup, with its broad distribution from Shanxi Province and northeastern China to Japan and New York, USA, exhibits a clear dispersal pattern. Specimens of Agnostrup spp., which can be as small as 1 cm, are easily transported during the movement of plants (
The Agnostrup genus, distributed in Japan, Shanxi Province in China, and the Sikhote-Alin mountains in Russia, may indicate its adaptation to temperate and subarctic climates. Although these regions are geographically dispersed, they share similar climate zones and ecological environments, particularly forested mountainous terrain. This similarity likely provides stable habitat for the genus, enabling it to survive and thrive in these areas. The distribution of the Agnostrup genus extends from Shanxi Province and northeastern China to Japan, further demonstrating its notable geographic dispersal pattern. This wide distribution may be driven by several factors. The climate and ecological environments of Shanxi Province and northeastern China are somewhat similar to those of Japan, particularly within temperate forest ecosystems, which may offer suitable habitats for the natural dispersal of Agnostrup. Additionally, the geographic proximity between Japan and northeastern China may facilitate the dispersal of the genus through natural pathways such as wind, river basins, or cross-ocean biological dispersal.
1 | With evident smooth insulae on the clypeus | 2 |
– | Without evident smooth insulae on the clypeus | 3 |
2 | Two large clypeal plagulae covering approximately one-half of the clypeus | A. striatus (Takakuwa, 1949) |
– | Two small clypeal plagulae covering approximately one-sixth of the clypeus | A. innuptus (Tsukamoto, 2022) |
3 | Clypeal plagulae with additional smooth or weak areolation area along posterior part of paraclypeal sutures | A. hoffmani (Foddai, Bonato, Pereira & Minelli, 2003) |
– | Clypeal plagulae without additional smooth or weak areolation area along posterior part of paraclypeal sutures | 4 |
4 | Telopodites of second maxillae with a short spine | A. oyamensis (Tsukamoto, 2022) |
– | Telopodites of second maxillae without a short spine | 5 |
5 | Forcipular articles II and III with a tubercle | A. striganovae (Titova, 1975) |
– | Forcipular articles II and III without a tubercle | A. paucipes (Miyosi, 1955) |
We sincerely thank Dr. Alessandro Minelli, Dr. Ivan H. Tuf, and Dr. Martin Husemann for their constructive comments and valuable suggestions on the manuscript, which have significantly contributed to improving its quality. We would like to thank Dr. Sho Tsukamoto for providing us with information about the type specimen of Arrup pauroporus (Takakuwa, 1936).
This research was supported by the National Natural Science Foundation of China (nos. 82073972 and 82204572), the key project at the central government level: The ability establishment of sustainable use for valuable Chinese medicine resources (nos. 2060302), and the CACMS Innovation Fund (CI2023E002).